{ "_id": "6ac206d0773a0037682c0b44", "Package": "GLMcat", "Title": "Generalized Linear Models for Categorical Responses", "Version": "0.2.7", "Authors@R": "c(person(given = \"Lorena\", family = \"León\",role = c(\"aut\", \"cre\"), email = \"ylorenaleonv@gmail.com\"),\nperson(given = \"Jean\", family = \"Peyhardi\", email = \"jean.peyhardi@umontpellier.fr\", role = \"aut\"),\nperson(given = \"Catherine\", family = \"Trottier\", email = \"catherine.trottier@umontpellier.fr\", role = \"aut\"))", "Description": "In statistical modeling, there is a wide variety of\nregression models for categorical dependent variables (nominal\nor ordinal data); yet, there is no software embracing all these\nmodels together in a uniform and generalized format. Following\nthe methodology proposed by Peyhardi, Trottier, and Guédon\n(2015) , we introduce 'GLMcat', an R\npackage to estimate generalized linear models implemented under\nthe unified specification (r, F, Z). Where r represents the\nratio of probabilities (reference, cumulative, adjacent, or\nsequential), F the cumulative cdf function for the linkage, and\nZ, the design matrix.", "License": "GPL-3", "Encoding": "UTF-8", "LazyData": "true", "RoxygenNote": "7.2.3", "VignetteBuilder": "knitr", "Config/testthat/edition": "3", "URL": "https://github.com/ylleonv/GLMcat", "BugReports": "https://github.com/ylleonv/GLMcat/issues", "Config/pak/sysreqs": "libicu-dev", "Repository": "https://ylleonv.r-universe.dev", "Date/Publication": "2024-09-19 09:28:15 UTC", "RemoteUrl": "https://github.com/ylleonv/glmcat", "RemoteRef": "HEAD", "RemoteSha": "c923a6137df3f1746be2c6f07e6cbf3919673bde", "NeedsCompilation": "yes", "Packaged": { "Date": "2026-10-04 07:34:50 UTC", "User": "root" }, "Author": "Lorena León [aut, cre],\nJean Peyhardi [aut],\nCatherine Trottier [aut]", "Maintainer": "Lorena León ", "_user": "ylleonv", "_type": "src", "_file": "GLMcat_0.2.7.tar.gz", "_fileid": "https://r2.ropensci.org/704b655f9ac347baad709cf6987da2341102ea35061fbc4b561ef7c4e2a504b6", "_filesize": 1457672, "_sha256": "704b655f9ac347baad709cf6987da2341102ea35061fbc4b561ef7c4e2a504b6", "_expires": "2027-01-12T07:57:03.000Z", "_created": "2026-10-04T07:34:50.000Z", "_published": "2026-10-04T07:57:04.864Z", "_jobs": [ { "job": 111388758687, "time": 184, "config": "linux-devel-arm64", "r": "4.7.0", "check": "NOTE", "artifact": "11296364431" }, { "job": 111388758660, "time": 211, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "NOTE", "artifact": "11296439133" }, { "job": 111388758639, "time": 204, "config": "linux-release-arm64", "r": "4.6.1", "check": "NOTE", "artifact": "11296679535" }, { "job": 111388758724, "time": 174, "config": "linux-release-x86_64", "r": "4.6.1", "check": "NOTE", "artifact": "11296299471" }, { "job": 111388758711, "time": 193, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "NOTE", "artifact": "11297791013" }, { "job": 111388758702, "time": 363, "config": "macos-oldrel-x86_64", "r": "4.5.3", "check": "NOTE", "artifact": "11297029919" }, { "job": 111388758707, "time": 158, "config": "macos-release-arm64", "r": "4.6.1", "check": "NOTE", "artifact": "11297084981" }, { "job": 111388758635, "time": 286, "config": "macos-release-x86_64", "r": "4.6.1", "check": "NOTE", "artifact": "11296579973" }, { "job": 111387774280, "time": 371, "config": "source", "r": "4.6.1", "check": "OK", "artifact": "11297147828" }, { "job": 111388758708, "time": 151, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "11296609629" }, { "job": 111388758647, "time": 432, "config": "windows-devel-arm64", "r": "4.7.0", "check": "NOTE", "artifact": "11296414599" }, { "job": 111388758695, "time": 234, "config": "windows-devel-x86_64", "r": "4.7.0", "check": "NOTE", "artifact": "11296234859" }, { "job": 111388758693, "time": 180, "config": "windows-oldrel-x86_64", "r": "4.5.3", "check": "NOTE", "artifact": "11296669421" }, { "job": 111388758697, "time": 391, "config": "windows-release-arm64", "r": "4.6.1", "check": "NOTE", "artifact": "11297216329" }, { "job": 111388758692, "time": 185, "config": "windows-release-x86_64", "r": "4.6.1", "check": "NOTE", "artifact": "11297450375" } ], "_host": "GitHub-Actions", "_buildurl": "https://github.com/r-universe/ylleonv/actions/runs/37185934801", "_status": "success", "_upstream": "https://github.com/ylleonv/glmcat", "_commit": { "id": "c923a6137df3f1746be2c6f07e6cbf3919673bde", "author": "Leon Velasco ", "committer": "Leon Velasco ", "message": "corr\n", "time": 1726738095 }, "_maintainer": { "name": "Lorena León", "email": "ylorenaleonv@gmail.com" }, "_distro": "resolute", "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 2.10", "role": "Depends" }, { "package": "Rcpp", "role": "LinkingTo" }, { "package": "BH", "role": "LinkingTo" }, { "package": "RcppEigen", "role": "LinkingTo" }, { "package": "Rcpp", "role": "Imports" }, { "package": "stats", "role": "Imports" }, { "package": "stringr", "role": "Imports" }, { "package": "ordinal", "role": "Imports" }, { "package": "knitr", "role": "Suggests" }, { "package": "rmarkdown", "role": "Suggests" }, { "package": "testthat", "version": ">= 3.0.0", "role": "Suggests" }, { "package": "dplyr", "role": "Suggests" }, { "package": "ggplot2", "role": "Suggests" }, { "package": "gridExtra", "role": "Suggests" }, { "package": "gtools", "role": "Suggests" }, { "package": "tidyr", "role": "Suggests" } ], "_owner": "ylleonv", "_selfowned": true, "_usedby": 0, "_updates": [], "_tags": [], "_stars": 4, "_contributors": [ { "user": "ylleonv", "count": 178, "uuid": 20670585 } ], "_userbio": { "uuid": 20670585, "type": "user", "name": "ylleonv", "followers": 2 }, "_downloads": { "count": 526, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/GLMcat" }, "_devurl": "https://github.com/ylleonv/glmcat", "_searchresults": 27, "_topics": [ "cpp" ], "_rbuild": "4.6.1", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/GLMcat.html", "extra/manual.pdf", "extra/NEWS.html", "extra/NEWS.txt", "extra/readme.html", "extra/readme.md" ], "_homeurl": "https://github.com/ylleonv/glmcat", "_realowner": "ylleonv", "_cranurl": true, "_releases": [ { "version": "0.1.0", "date": "2020-12-18" }, { "version": "0.1.1", "date": "2021-01-16" }, { "version": "0.2.0", "date": "2021-03-05" }, { "version": "0.2.1", "date": "2021-03-07" }, { "version": "0.2.2", "date": "2021-05-10" }, { "version": "0.2.3", "date": "2021-05-18" }, { "version": "0.2.4", "date": "2021-09-23" }, { "version": "0.2.5", "date": "2022-08-17" }, { "version": "0.2.6", "date": "2024-01-17" }, { "version": "0.2.7", "date": "2024-09-20" }, { "version": "1.0.0", "date": "2025-09-04" } ], "_exports": [ "control_glmcat", "discrete_cm", "glmcat" ], "_datasets": [ { "name": "accidents", "title": "Accidents Dataset", "object": "accidents", "class": [ "tbl_df", "tbl", "data.frame" ], "fields": [ "accident_severity", "road_type", "weather_conditions", "light_conditions", "day_of_week", "number_of_casualties", "urban_or_rural_area", "speed_limit", "junction_detail", "carriageway_hazards", "weather", "road" ], "rows": 109577, "table": true, "tojson": true }, { "name": "DisturbedDreams", "title": "Severity of disturbed dreams", "object": "DisturbedDreams", "class": [ "data.frame" ], "fields": [ "Age", "Level" ], "rows": 223, "table": true, "tojson": true }, { "name": "TravelChoice", "title": "Travel Mode Choice", "object": "TravelChoice", "class": [ "data.frame" ], "fields": [ "indv", "mode", "choice", "ttme", "invc", "invt", "gc", "hinc", "psize" ], "rows": 840, "table": true, "tojson": true } ], "_help": [ { "page": "accidents", "title": "Accidents Dataset", "topics": [ "accidents" ] }, { "page": "anova", "title": "Anova for a fitted 'glmcat' model object", "topics": [ "anova.glmcat" ] }, { "page": "coef", "title": "Model coefficients of a fitted 'glmcat' model object", "topics": [ "coef.glmcat" ] }, { "page": "confint.glmcat", "title": "Confidence intervals for parameters of a fitted 'glmcat' model object", "topics": [ "confint.glmcat" ] }, { "page": "control_glmcat", "title": "Control parameters for 'glmcat' models", "topics": [ "control_glmcat" ] }, { "page": "discrete_cm", "title": "Discrete Choice Models", "topics": [ "discrete_cm" ] }, { "page": "DisturbedDreams", "title": "Severity of disturbed dreams", "topics": [ "DisturbedDreams" ] }, { "page": "extractAIC", "title": "Extract AIC from a fitted 'glmcat' model object", "topics": [ "extractAIC.glmcat" ] }, { "page": "glmcat", "title": "Generalized linear models for categorical responses", "topics": [ "glmcat" ] }, { "page": "logLik", "title": "Log-likelihood of a fitted 'glmcat' model object", "topics": [ "logLik.glmcat" ] }, { "page": "nobs", "title": "Number of observations of a fitted 'glmcat' model object", "topics": [ "nobs.glmcat" ] }, { "page": "plot", "title": "Plot method for a fitted 'glmcat' model object", "topics": [ "plot.glmcat" ] }, { "page": "predict", "title": "Predict method for a a fitted 'glmcat' model object", "topics": [ "predict.glmcat" ] }, { "page": "print.anova", "title": "Printing Anova for 'glmcat' model fits", "topics": [ "print.anova.glmcat" ] }, { "page": "print", "title": "Print method for a fitted 'glmcat' model object", "topics": [ "print.glmcat" ] }, { "page": "print.summary.glmcat", "title": "Printing a fitted 'glmcat' model object", "topics": [ "print.summary.glmcat" ] }, { "page": "step", "title": "Stepwise for a 'glmcat' model object", "topics": [ "step.glmcat" ] }, { "page": "summary", "title": "Summary method for a fitted 'glmcat' model object", "topics": [ "summary.glmcat" ] }, { "page": "terms", "title": "Terms of a fitted 'glmcat' model object", "topics": [ "terms.glmcat" ] }, { "page": "TravelChoice", "title": "Travel Mode Choice", "topics": [ "TravelChoice" ] }, { "page": "vcov", "title": "Variance-Covariance Matrix for a fitted 'glmcat' model object", "topics": [ "vcov.glmcat" ] } ], "_readme": "https://github.com/ylleonv/glmcat/raw/HEAD/README.md", "_rundeps": [ "BH", "cli", "glue", "lattice", "lifecycle", "magrittr", "MASS", "Matrix", "nlme", "numDeriv", "ordinal", "Rcpp", "RcppEigen", "rlang", "stringi", "stringr", "ucminf", "vctrs" ], "_sysdeps": [ { "shlib": "libstdc++", "package": "libstdc++6", "source": "gcc", "version": "16-20260322-1ubuntu1", "name": "c++", "homepage": "http://gcc.gnu.org/", "description": "GNU Standard C++ Library v3" } ], "_vignettes": [ { "source": "GLMcat_tutorial.Rmd", "filename": "GLMcat_tutorial.pdf", "title": "A tutorial on fitting Generalized Linear Models for categorical responses with the GLMcat package", "author": "Lorena León^[Université de Montpellier, ylorenaleonv@gmail.com], Jean Peyhardi^[Université de Montpellier, jean.peyhardi@umontpellier.fr], Catherine Trottier^[Université de Montpellier, catherine.trottier@umontpellier.fr]", "engine": "knitr::rmarkdown", "headings": [ "Introduction to the (r,F,Z) methodology:", "Ratio of probabilities r\\", "Cumulative cdf function F\\", "Design Matrix $Z$\\", "Fitting (r,F,Z) with the glmcat package", "Family of reference models", "Family of adjacent models", "Family of sequential models", "Family of cumulative models", "Conclusion", "References" ], "created": "2023-06-10 10:39:01", "modified": "2023-08-07 21:55:06", "commits": 2 }, { "source": "Var_sel_ex.Rmd", "filename": "Var_sel_ex.pdf", "title": "An example of variable selection in GLMcat", "author": "Lorena León^[Université de Montpellier, ylorenaleonv@gmail.com], Jean Peyhardi^[Université de Montpellier, jean.peyhardi@umontpellier.fr], Catherine Trottier^[Université de Montpellier, catherine.trottier@umontpellier.fr]", "engine": "knitr::rmarkdown", "headings": [ "Student CDF", "Logistic CDF" ], "created": "2023-08-07 21:55:06", "modified": "2023-08-07 21:55:06", "commits": 1 }, { "source": "Discrete_CM_examples.Rmd", "filename": "Discrete_CM_examples.pdf", "title": "An example of discrete choice modeling in GLMcat", "author": "Lorena León^[Université de Montpellier, ylorenaleonv@gmail.com], Jean Peyhardi^[Université de Montpellier, jean.peyhardi@umontpellier.fr], Catherine Trottier^[Université de Montpellier, catherine.trottier@umontpellier.fr]", "engine": "knitr::rmarkdown", "headings": [ "Dataset", "Conclusion", "References" ], "created": "2023-06-10 10:39:01", "modified": "2023-06-10 10:39:01", "commits": 1 } ], "_score": 5.209515014542631, "_indexed": true, "_nocasepkg": "glmcat", "_universes": [ "ylleonv" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "0.2.7", "date": "2026-10-04T07:38:03.000Z", "distro": "resolute", "arch": "aarch64", "commit": "c923a6137df3f1746be2c6f07e6cbf3919673bde", "fileid": "https://r2.ropensci.org/837ae8faa529bca5e0f86291453c9129cbfa94ed1a9d09cd16fd42f4e5acb6b3", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/ylleonv/actions/runs/37185934801" }, { "r": "4.7.0", "os": "linux", "version": "0.2.7", "date": "2026-10-04T07:38:13.000Z", "distro": "resolute", "arch": "x86_64", "commit": "c923a6137df3f1746be2c6f07e6cbf3919673bde", "fileid": "https://r2.ropensci.org/0d8ac12ccdd44f49e01e485b4677db574138f66a46768fdac0eb91ffc3c71284", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/ylleonv/actions/runs/37185934801" }, { "r": "4.6.1", "os": "linux", "version": "0.2.7", "date": "2026-10-04T07:38:22.000Z", "distro": "resolute", "arch": "aarch64", "commit": "c923a6137df3f1746be2c6f07e6cbf3919673bde", "fileid": "https://r2.ropensci.org/d11c539a5c0f37a7b12ec07005693f9c267d11c64a0b915e8046cabd4725e1a4", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/ylleonv/actions/runs/37185934801" }, { "r": "4.6.1", "os": "linux", "version": "0.2.7", "date": "2026-10-04T07:37:56.000Z", "distro": "resolute", "arch": "x86_64", "commit": "c923a6137df3f1746be2c6f07e6cbf3919673bde", "fileid": "https://r2.ropensci.org/b4285e26ad0e6d93aee50d5aa3a86bdf1689821f61dd93fd023741d0d4c788fd", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/ylleonv/actions/runs/37185934801" }, { "r": "4.5.3", "os": "mac", "version": "0.2.7", "date": "2026-10-04T07:55:38.000Z", "arch": "aarch64", "commit": "c923a6137df3f1746be2c6f07e6cbf3919673bde", "fileid": "https://r2.ropensci.org/0ea4736bb7617d00e52e5950b9968c894f2f9bb7d864d52aaf4c29d00598cb02", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/ylleonv/actions/runs/37185934801" }, { "r": "4.5.3", "os": "mac", "version": "0.2.7", "date": "2026-10-04T07:52:27.000Z", "arch": "x86_64", "commit": "c923a6137df3f1746be2c6f07e6cbf3919673bde", "fileid": "https://r2.ropensci.org/ac41126b179e94cf35931496c3f06bff01156dcebe2fa404b944a93c4b19af8a", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/ylleonv/actions/runs/37185934801" }, { "r": "4.6.1", "os": "mac", "version": "0.2.7", "date": "2026-10-04T07:54:32.000Z", "arch": "aarch64", "commit": "c923a6137df3f1746be2c6f07e6cbf3919673bde", "fileid": "https://r2.ropensci.org/f90e34dc2dba46ed485cc47bc31ce26aba6afccec11c132bca8a412a079f842d", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/ylleonv/actions/runs/37185934801" }, { "r": "4.6.1", "os": "mac", "version": "0.2.7", "date": "2026-10-04T07:43:19.000Z", "arch": "x86_64", "commit": "c923a6137df3f1746be2c6f07e6cbf3919673bde", "fileid": "https://r2.ropensci.org/c413c68b385aa452ddd02252169cf461124c679f619501c9028a8981e5c7e803", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/ylleonv/actions/runs/37185934801" }, { "r": "4.6.0", "os": "wasm", "version": "0.2.7", "date": "2026-10-04T07:37:55.000Z", "arch": "emscripten", "commit": "c923a6137df3f1746be2c6f07e6cbf3919673bde", "fileid": "https://r2.ropensci.org/66c16b2fb349e610100d4e652e5dd881c13a5d80d1dcf8290b3e223385edbf0b", "status": "success", "buildurl": "https://github.com/r-universe/ylleonv/actions/runs/37185934801" }, { "r": "4.7.0", "os": "win", "version": "0.2.7", "date": "2026-10-04T07:41:21.000Z", "arch": "aarch64", "commit": "c923a6137df3f1746be2c6f07e6cbf3919673bde", "fileid": "https://r2.ropensci.org/61bf61ed15e1433d7415cf37e3e042482a8f165d01b87d2f84e8404ca0df72f8", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/ylleonv/actions/runs/37185934801" }, { "r": "4.7.0", "os": "win", "version": "0.2.7", "date": "2026-10-04T07:37:12.000Z", "arch": "x86_64", "commit": "c923a6137df3f1746be2c6f07e6cbf3919673bde", "fileid": "https://r2.ropensci.org/6e956eb28b040b07af6e56f75b0f5581733a49412346c283f7927b853b131a9c", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/ylleonv/actions/runs/37185934801" }, { "r": "4.5.3", "os": "win", "version": "0.2.7", "date": "2026-10-04T07:37:11.000Z", "arch": "x86_64", "commit": "c923a6137df3f1746be2c6f07e6cbf3919673bde", "fileid": "https://r2.ropensci.org/40c2cf3be01f051f68fcdba9edb88316ce80d2731f1b4802005dab6f60a4314e", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/ylleonv/actions/runs/37185934801" }, { "r": "4.6.1", "os": "win", "version": "0.2.7", "date": "2026-10-04T07:40:38.000Z", "arch": "aarch64", "commit": "c923a6137df3f1746be2c6f07e6cbf3919673bde", "fileid": "https://r2.ropensci.org/e1d67f435a555179095de1109e9f9764cfea5a590815c764cad3de03a7e695c8", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/ylleonv/actions/runs/37185934801" }, { "r": "4.6.1", "os": "win", "version": "0.2.7", "date": "2026-10-04T07:37:09.000Z", "arch": "x86_64", "commit": "c923a6137df3f1746be2c6f07e6cbf3919673bde", "fileid": "https://r2.ropensci.org/2bcf7fe2d61b14bcd4e0877c7d1c832d6e9674e845a9b35e8b340dd3ee4970bf", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/ylleonv/actions/runs/37185934801" } ] }